The application of environmental DNA approaches for high-resolution reconstruction of sea-level change

Research aims

The project is structured around three core objectives. First, method development focuses on establishing robust protocols for the extraction and analysis of foraminiferal eDNA from saltmarsh sediments. Second, calibration and validation aim to produce a modern training dataset that links eDNA-derived assemblages with elevation and key environmental gradients, while also comparing these results with those obtained through traditional microscopy-based identifications. Finally, the application objective evaluates the potential of eDNA data to support quantitative sea-level reconstructions using transfer function and machine-learning approaches.

Methods

The PhD candidate will combine and develop multiple methods, including coastal fieldwork and surveying, micropalaeontology and sediment analysis, molecular laboratory techniques (such as eDNA extraction and metabarcoding), and statistical and computational data analysis. The candidate will receive full training in any areas they choose to pursue and is therefore not expected to have prior experience in all of these areas upon application. Through the course of the PhD, it is anticipated that the candidate will develop into a leading researcher in this emerging field.

References

• Barlow, N.L., Shennan, I., Long, A.J., Gehrels, W.R., Saher, M.H., Woodroffe, S.A. and Hillier, C., 2013. Salt marshes as late Holocene tide gauges. Global and Planetary Change, 106, pp.90-110
• Liu, Z., Khan, N.S., Yu, H.K., Chung, A., Schweizer, M. and Schunter, C., 2025. Foraminiferal environmental DNA reveals late Holocene sea-level changes. Communications Earth & Environment
• Rush, G., McDarby, P., Edwards, R., Milker, Y., Garrett, E. and Gehrels, W.R., 2021. Development of an intertidal foraminifera training set for the North Sea and an assessment of its application for Holocene sea-level reconstructions. Marine Micropaleontology, 169, p.102055

Duration of funding: 36 months (three years)

Stipend Value: £21,805 (UKRI 2026/2027 rate)

Stipends are tax-free and paid pro-rata in monthly payments

To apply, please visit the application portal which can be found through the Apply Now button. You need to select the project you would like to apply for, and include the application reference number clearly in your application. Please ensure that you include the following documents for a complete application:

• Your research proposal - you are advised to read through the research proposal guidance
• A statement of purpose (maximum 1000 words) that should include:
  • What knowledge, skills, and training would you bring to the proposed research? This may include relevant academic study, relevant experience as a professional or practitioner, and any specific training in research skills/methods
  • Why do you want to undertake this research at Leeds Beckett University?
  • How does the proposed research relate to your career goals?
• Scanned copies of your degree certificates (e.g. undergraduate or masters degree certificates) and transcripts
• Scanned copies of your English language qualification
• A current CV - you should include your employment history or other professional experience, including internships
• One academic reference